PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_06761
Common NameKK1_006951
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB
Protein Properties Length: 360aa    MW: 40855.7 Da    PI: 9.8619
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_06761genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.97.2e-16453148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48
                     r+rW +eEd ll  +vkq+G++ W++++++m+  ++R +k+c +rw +yl
    C.cajan_06761  4 RQRWRAEEDALLRAYVKQYGPREWNLVSQRMNtpLNRDAKSCLERWKNYL 53
                     89**********************************************97 PP

2Myb_DNA-binding34.45.2e-1159103147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +g+ T+eE+ l +++ + +G++ Wk+Ia+ ++ gRt+k +  +w  +
    C.cajan_06761  59 KGSLTEEEQRLVINLQATHGNK-WKKIAAQVP-GRTAKRLGKWWEVF 103
                      6788******************.*********.*****999999766 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129423.01157IPR017930Myb domain
SMARTSM007171.1E-13355IPR001005SANT/Myb domain
SuperFamilySSF466891.27E-21498IPR009057Homeodomain-like
CDDcd001673.61E-9653No hitNo description
Gene3DG3DSA:1.10.10.601.4E-20660IPR009057Homeodomain-like
PfamPF139212.8E-14768No hitNo description
PROSITE profilePS5129417.82258108IPR017930Myb domain
SMARTSM007171.7E-958106IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.604.6E-1561102IPR009057Homeodomain-like
CDDcd001671.68E-663104No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008356Biological Processasymmetric cell division
GO:0009615Biological Processresponse to virus
GO:0009651Biological Processresponse to salt stress
GO:0009733Biological Processresponse to auxin
GO:0009739Biological Processresponse to gibberellin
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0009944Biological Processpolarity specification of adaxial/abaxial axis
GO:0010338Biological Processleaf formation
GO:0042742Biological Processdefense response to bacterium
GO:0045088Biological Processregulation of innate immune response
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0046686Biological Processresponse to cadmium ion
GO:0050832Biological Processdefense response to fungus
GO:0000793Cellular Componentcondensed chromosome
GO:0005730Cellular Componentnucleolus
GO:0003677Molecular FunctionDNA binding
GO:0042803Molecular Functionprotein homodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    Send to blast
MKDRQRWRAE EDALLRAYVK QYGPREWNLV SQRMNTPLNR DAKSCLERWK NYLKPGIKKG  60
SLTEEEQRLV INLQATHGNK WKKIAAQVPG RTAKRLGKWW EVFKEKQQRE TKGNNCAIDP  120
INDSKYEHIL ESFAEKLVKD RPSPSFVMAT SNSSYLHADA PVPVPAPALL PSWLSNSNGT  180
AAPVRPPSPS VTLSLSPSTV AAPPAWLQPV RGPDNTRPLV LGNVAPHGGA VLAFGENMVM  240
SELVECCKEL EEVHHALAAH KKEAAWRLSR VELQLESEKA SRRREKMEEV EAKMKALREE  300
QTVALDRIEA EYREQLAGLR RDAESKEQKL AEQWAAKHLR LTKFLEQVGC RSWLNEPNGR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A5e-167921092B-MYB
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007140319.10.0hypothetical protein PHAVU_008G102300g
SwissprotO809311e-158AS1_ARATH; Transcription factor AS1
TrEMBLA0A151U4M70.0A0A151U4M7_CAJCA; Transcription factor AS1
STRINGGLYMA18G39771.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF25973369
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37630.11e-115MYB family protein